Survival-associated meQTLs across different cancer types


We identified 23,432 meQTLs associated with patient overall survival across different cancer types at FDR < 0.05.


e.g., "BLCA"
e.g., "rs11600543"


Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
log-rank test p-value
Sample size
Median survival time AA
Median survival time Aa
Median survival time aa
Dispaly
KIRC rs13198172 chr6:2427047 G/C 8.58E-8 516 39.7 41.27 12.25 KM Plot
KIRC rs13199775 chr6:25828782 A/T 4.72E-5 525 42.2 30.92 4.1 KM Plot
KIRC rs13200888 chr6:26100198 G/A 1.14E-8 513 41.27 36.87 3.37 KM Plot
KIRC rs13201821 chr6:26057781 A/C 7.62E-9 520 41.27 36.95 3.37 KM Plot
KIRC rs13202371 chr6:25935489 A/G 2.04E-5 522 42.27 31.53 6.8 KM Plot
KIRC rs13203673 chr6:25979122 T/C 3.77E-9 520 41.13 35.7 3.37 KM Plot
KIRC rs13206501 chr6:26110148 T/C 1.47E-8 510 42.2 36.95 3.37 KM Plot
KIRC rs13207673 chr6:25901133 C/T 1.62E-9 523 41.27 35.7 2.38 KM Plot
KIRC rs13208859 chr6:25894609 G/A 1.56E-9 519 41.27 36.28 2.38 KM Plot
KIRC rs13209864 chr6:130429587 G/C 1.48E-5 518 39 45.78 7.4 KM Plot
KIRC rs13210399 chr6:26095643 G/A 1.31E-8 510 41 36.28 3.37 KM Plot
KIRC rs13212652 chr6:26099279 T/G 1.58E-8 509 42.2 35.7 3.37 KM Plot
KIRC rs13214280 chr6:26008620 C/T 9.23E-9 520 41.27 37.2 3.37 KM Plot
KIRC rs13214285 chr6:2388463 C/T 2.98E-6 517 39.85 39.17 15.55 KM Plot
KIRC rs13216785 chr6:26079185 C/T 9.65E-9 518 41.73 36.87 3.37 KM Plot